Microarray and Next Gen Sequencing Services
Microarray Services (using Agilent Platform)
- Gene expression
- aCGH (Comparative Genomics Hybridization)
- ChIP on chip (DNA-Protein interaction studies)
- Methylation profiling
- miRNA profiling
- Applications to validate NGS data
Custom Microarray Design
- Gene expression profiling for specific pathways, disease conditions etc. – Eg: Cancer specific genes.
- Promoter / genome tiling for ChIP assays – Eg: Coverage of a few kb upstream and downstream from promoter
- Gene / Genome centric aCGH design
- High density tiling microarray designs for discovery of genomic variations like SNP, InDels and QTLs.
Next Gen Sequencing Services (Using Illumina GAIIx and Iont Torrent)
- Whole genome sequencing
- Targeted Re-sequencing
- SNP and Mutation identification
- Transcriptome sequencing
- Digital gene expression
- ChIP sequencing
- Methylome sequencing
- Small RNA sequencing
Data analysis for all Next Generation Sequencing platforms (Illumina, 454 & SOLiD)
- QC of Next Generation Sequencing data
- iVariance analysis
- ChIP-Seq analysis
- Enrichment analysis for genome partition/focused re-sequencing
- Assembly of Denovo sequencing raw data